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Article: Phylogenetic and recombination analysis of coronavirus HKU1, a novel coronavirus from patients with pneumonia

TitlePhylogenetic and recombination analysis of coronavirus HKU1, a novel coronavirus from patients with pneumonia
Authors
Woo, PCYLau, SKPHuang, YTsoi, HWChan, KHYuen, KY
Issue Date2005
PublisherSpringer Wien. The Journal's web site is located at http://www.springer.com/springerwiennewyork/medicine/journal/705
Citation
Archives Of Virology, 2005, v. 150 n. 11, p. 2299-2311 How to Cite?
DOI: http://dx.doi.org/10.1007/s00705-005-0573-2
AbstractPhylogenetic trees constructed using predicted amino acid sequences of putative proteins of coronavirus HKU1 (CoV-HKU1) revealed that CoV-HKU1 formed a distinct branch among group 2 coronaviruses. Of the 14 trees from p65 to nsp10, nine showed that CoV-HKU1 was clustered with murine hepatitis virus. From nsp11, the topologies of the trees changed dramatically. For the eight trees from nsp11 to N, seven showed that the CoV-HKU1 branch was the first branch. The codon usage patterns of CoV-HKU1 differed significantly from those in other group 2 coronaviruses. Split decomposition analysis revealed that recombination events had occurred between CoV-HKU1 and other coronaviruses. © Springer-Verlag 2005.
Persistent Identifierhttp://hdl.handle.net/10722/79132
ISSN
0304-8608
2023 Impact Factor: 2.5
2023 SCImago Journal Rankings: 0.590
ISI Accession Number ID
WOS:000232623200008
References
References in Scopus

 

DC FieldValueLanguage
dc.contributor.authorWoo, PCYen_HK
dc.contributor.authorLau, SKPen_HK
dc.contributor.authorHuang, Yen_HK
dc.contributor.authorTsoi, HWen_HK
dc.contributor.authorChan, KHen_HK
dc.contributor.authorYuen, KYen_HK
dc.date.accessioned2010-09-06T07:50:58Z-
dc.date.available2010-09-06T07:50:58Z-
dc.date.issued2005en_HK
dc.identifier.citationArchives Of Virology, 2005, v. 150 n. 11, p. 2299-2311en_HK
dc.identifier.issn0304-8608en_HK
dc.identifier.urihttp://hdl.handle.net/10722/79132-
dc.description.abstractPhylogenetic trees constructed using predicted amino acid sequences of putative proteins of coronavirus HKU1 (CoV-HKU1) revealed that CoV-HKU1 formed a distinct branch among group 2 coronaviruses. Of the 14 trees from p65 to nsp10, nine showed that CoV-HKU1 was clustered with murine hepatitis virus. From nsp11, the topologies of the trees changed dramatically. For the eight trees from nsp11 to N, seven showed that the CoV-HKU1 branch was the first branch. The codon usage patterns of CoV-HKU1 differed significantly from those in other group 2 coronaviruses. Split decomposition analysis revealed that recombination events had occurred between CoV-HKU1 and other coronaviruses. © Springer-Verlag 2005.en_HK
dc.languageengen_HK
dc.publisherSpringer Wien. The Journal's web site is located at http://www.springer.com/springerwiennewyork/medicine/journal/705en_HK
dc.relation.ispartofArchives of Virologyen_HK
dc.subject.meshCodon - geneticsen_HK
dc.subject.meshConserved Sequenceen_HK
dc.subject.meshCoronavirus - classification - genetics - isolation & purificationen_HK
dc.subject.meshHumansen_HK
dc.subject.meshPhylogenyen_HK
dc.subject.meshPneumonia, Viral - virologyen_HK
dc.subject.meshRecombination, Geneticen_HK
dc.titlePhylogenetic and recombination analysis of coronavirus HKU1, a novel coronavirus from patients with pneumoniaen_HK
dc.typeArticleen_HK
dc.identifier.openurlhttp://library.hku.hk:4550/resserv?sid=HKU:IR&issn=0304-8608&volume=150&issue=11&spage=2299&epage=311&date=2005&atitle=Phylogenetic+and+recombination+analysis+of+coronavirus+HKU1,+a+novel+coronavirus+from+patients+with+pneumonia.en_HK
dc.identifier.emailWoo, PCY:pcywoo@hkucc.hku.hken_HK
dc.identifier.emailLau, SKP:skplau@hkucc.hku.hken_HK
dc.identifier.emailTsoi, HW:hwtsoi@hkucc.hku.hken_HK
dc.identifier.emailYuen, KY:kyyuen@hkucc.hku.hken_HK
dc.identifier.authorityWoo, PCY=rp00430en_HK
dc.identifier.authorityLau, SKP=rp00486en_HK
dc.identifier.authorityTsoi, HW=rp00439en_HK
dc.identifier.authorityYuen, KY=rp00366en_HK
dc.description.naturelink_to_subscribed_fulltext-
dc.identifier.doi10.1007/s00705-005-0573-2en_HK
dc.identifier.pmid15986174-
dc.identifier.scopuseid_2-s2.0-26844532049en_HK
dc.identifier.hkuros109677en_HK
dc.relation.referenceshttp://www.scopus.com/mlt/select.url?eid=2-s2.0-26844532049&selection=ref&src=s&origin=recordpageen_HK
dc.identifier.volume150en_HK
dc.identifier.issue11en_HK
dc.identifier.spage2299en_HK
dc.identifier.epage2311en_HK
dc.identifier.isiWOS:000232623200008-
dc.publisher.placeAustriaen_HK
dc.identifier.scopusauthoridWoo, PCY=7201801340en_HK
dc.identifier.scopusauthoridLau, SKP=7401596211en_HK
dc.identifier.scopusauthoridHuang, Y=35597414700en_HK
dc.identifier.scopusauthoridTsoi, HW=6603822102en_HK
dc.identifier.scopusauthoridChan, KH=35338760600en_HK
dc.identifier.scopusauthoridYuen, KY=36078079100en_HK
dc.identifier.issnl0304-8608-

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