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Article: Territory-wide cohort study of Brugada syndrome in Hong Kong: Predictors of long-Term outcomes using random survival forests and non-negative matrix factorisation

TitleTerritory-wide cohort study of Brugada syndrome in Hong Kong: Predictors of long-Term outcomes using random survival forests and non-negative matrix factorisation
Authors
Keywordsarrhythmias
biostatistics
cardiac
electronic health records
ventricular fibrillation
ventricular tachycardia
Issue Date2021
Citation
Open Heart, 2021, v. 8, n. 1, article no. e001505 How to Cite?
AbstractObjectives Brugada syndrome (BrS) is an ion channelopathy that predisposes affected patients to spontaneous ventricular tachycardia/fibrillation (VT/VF) and sudden cardiac death. The aim of this study is to examine the predictive factors of spontaneous VT/VF. Methods This was a territory-wide retrospective cohort study of patients diagnosed with BrS between 1997 and 2019. The primary outcome was spontaneous VT/VF. Cox regression was used to identify significant risk predictors. Non-linear interactions between variables (latent patterns) were extracted using non-negative matrix factorisation (NMF) and used as inputs into the random survival forest (RSF) model. Results This study included 516 consecutive BrS patients (mean age of initial presentation=50±16 years, male=92%) with a median follow-up of 86 (IQR: 45-118) months. The cohort was divided into subgroups based on initial disease manifestation: Asymptomatic (n=314), syncope (n=159) or VT/VF (n=41). Annualised event rates per person-year were 1.70%, 0.05% and 0.01% for the VT/VF, syncope and asymptomatic subgroups, respectively. Multivariate Cox regression analysis revealed initial presentation of VT/VF (HR=24.0, 95% CI=1.21 to 479, p=0.037) and SD of P-wave duration (HR=1.07, 95% CI=1.00 to 1.13, p=0.044) were significant predictors. The NMF-RSF showed the best predictive performance compared with RSF and Cox regression models (precision: 0.87 vs 0.83 vs. 0.76, recall: 0.89 vs. 0.85 vs 0.73, F1-score: 0.88 vs 0.84 vs 0.74). Conclusions Clinical history, electrocardiographic markers and investigation results provide important information for risk stratification. Machine learning techniques using NMF and RSF significantly improves overall risk stratification performance.
Persistent Identifierhttp://hdl.handle.net/10722/330427
ISSN
ISI Accession Number ID

 

DC FieldValueLanguage
dc.contributor.authorLee, Sharen-
dc.contributor.authorZhou, Jiandong-
dc.contributor.authorLi, Ka Hou Christien-
dc.contributor.authorLeung, Keith Sai Kit-
dc.contributor.authorLakhani, Ishan-
dc.contributor.authorLiu, Tong-
dc.contributor.authorWong, Ian Chi Kei-
dc.contributor.authorMok, Ngai Shing-
dc.contributor.authorMak, Chloe-
dc.contributor.authorJeevaratnam, Kamalan-
dc.contributor.authorZhang, Qingpeng-
dc.contributor.authorTse, Gary-
dc.date.accessioned2023-09-05T12:10:31Z-
dc.date.available2023-09-05T12:10:31Z-
dc.date.issued2021-
dc.identifier.citationOpen Heart, 2021, v. 8, n. 1, article no. e001505-
dc.identifier.issn2398-595X-
dc.identifier.urihttp://hdl.handle.net/10722/330427-
dc.description.abstractObjectives Brugada syndrome (BrS) is an ion channelopathy that predisposes affected patients to spontaneous ventricular tachycardia/fibrillation (VT/VF) and sudden cardiac death. The aim of this study is to examine the predictive factors of spontaneous VT/VF. Methods This was a territory-wide retrospective cohort study of patients diagnosed with BrS between 1997 and 2019. The primary outcome was spontaneous VT/VF. Cox regression was used to identify significant risk predictors. Non-linear interactions between variables (latent patterns) were extracted using non-negative matrix factorisation (NMF) and used as inputs into the random survival forest (RSF) model. Results This study included 516 consecutive BrS patients (mean age of initial presentation=50±16 years, male=92%) with a median follow-up of 86 (IQR: 45-118) months. The cohort was divided into subgroups based on initial disease manifestation: Asymptomatic (n=314), syncope (n=159) or VT/VF (n=41). Annualised event rates per person-year were 1.70%, 0.05% and 0.01% for the VT/VF, syncope and asymptomatic subgroups, respectively. Multivariate Cox regression analysis revealed initial presentation of VT/VF (HR=24.0, 95% CI=1.21 to 479, p=0.037) and SD of P-wave duration (HR=1.07, 95% CI=1.00 to 1.13, p=0.044) were significant predictors. The NMF-RSF showed the best predictive performance compared with RSF and Cox regression models (precision: 0.87 vs 0.83 vs. 0.76, recall: 0.89 vs. 0.85 vs 0.73, F1-score: 0.88 vs 0.84 vs 0.74). Conclusions Clinical history, electrocardiographic markers and investigation results provide important information for risk stratification. Machine learning techniques using NMF and RSF significantly improves overall risk stratification performance.-
dc.languageeng-
dc.relation.ispartofOpen Heart-
dc.subjectarrhythmias-
dc.subjectbiostatistics-
dc.subjectcardiac-
dc.subjectelectronic health records-
dc.subjectventricular fibrillation-
dc.subjectventricular tachycardia-
dc.titleTerritory-wide cohort study of Brugada syndrome in Hong Kong: Predictors of long-Term outcomes using random survival forests and non-negative matrix factorisation-
dc.typeArticle-
dc.description.naturelink_to_subscribed_fulltext-
dc.identifier.doi10.1136/openhrt-2020-001505-
dc.identifier.scopuseid_2-s2.0-85100753529-
dc.identifier.volume8-
dc.identifier.issue1-
dc.identifier.spagearticle no. e001505-
dc.identifier.epagearticle no. e001505-
dc.identifier.eissn2053-3624-
dc.identifier.isiWOS:000617510900004-

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