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Conference Paper: Unconstrained Optimization in Projection Method for Indefinite SVMs

TitleUnconstrained Optimization in Projection Method for Indefinite SVMs
Authors
Issue Date2016
PublisherIEEE. The Journal's web site is located at http://ieeexplore.ieee.org/xpl/conhome.jsp?punumber=1001586
Citation
Proceedings of 2016 IEEE International Conference on Bioinformatics and Biomedicine (IEEE BIBM 2016), Shenzhen, China, 15-18 December 2016, p. 584-591 How to Cite?
AbstractPositive semi-definiteness is a critical property in Support Vector Machine (SVM) methods to ensure efficient solutions through convex quadratic programming. In this paper, we introduce a projection matrix on indefinite kernels to formulate a positive semi-definite one. The proposed model can be regarded as a generalized version of the spectrum method (denoising method and flipping method) by varying parameter λ. In particular, our suggested optimal λ under the Bregman matrix divergence theory can be obtained using unconstrained optimization. Experimental results on 4 real world data sets ranging from glycan classification to cancer prediction show that the proposed model can achieve better or competitive performance when compared to the related indefinite kernel methods. This may suggest a new way in motif extractions or cancer predictions.
Persistent Identifierhttp://hdl.handle.net/10722/256444

 

DC FieldValueLanguage
dc.contributor.authorJiang, H-
dc.contributor.authorChing, WK-
dc.contributor.authorQiu, YS-
dc.contributor.authorCheng, XQ-
dc.date.accessioned2018-07-20T06:34:47Z-
dc.date.available2018-07-20T06:34:47Z-
dc.date.issued2016-
dc.identifier.citationProceedings of 2016 IEEE International Conference on Bioinformatics and Biomedicine (IEEE BIBM 2016), Shenzhen, China, 15-18 December 2016, p. 584-591-
dc.identifier.urihttp://hdl.handle.net/10722/256444-
dc.description.abstractPositive semi-definiteness is a critical property in Support Vector Machine (SVM) methods to ensure efficient solutions through convex quadratic programming. In this paper, we introduce a projection matrix on indefinite kernels to formulate a positive semi-definite one. The proposed model can be regarded as a generalized version of the spectrum method (denoising method and flipping method) by varying parameter λ. In particular, our suggested optimal λ under the Bregman matrix divergence theory can be obtained using unconstrained optimization. Experimental results on 4 real world data sets ranging from glycan classification to cancer prediction show that the proposed model can achieve better or competitive performance when compared to the related indefinite kernel methods. This may suggest a new way in motif extractions or cancer predictions.-
dc.languageeng-
dc.publisherIEEE. The Journal's web site is located at http://ieeexplore.ieee.org/xpl/conhome.jsp?punumber=1001586-
dc.relation.ispartofIEEE International Conference on Bioinformatics and Biomedicine Proceedings-
dc.rightsIEEE International Conference on Bioinformatics and Biomedicine Proceedings. Copyright © IEEE.-
dc.rights©2016 IEEE. Personal use of this material is permitted. Permission from IEEE must be obtained for all other uses, in any current or future media, including reprinting/republishing this material for advertising or promotional purposes, creating new collective works, for resale or redistribution to servers or lists, or reuse of any copyrighted component of this work in other works.-
dc.titleUnconstrained Optimization in Projection Method for Indefinite SVMs-
dc.typeConference_Paper-
dc.identifier.emailChing, WK: wching@hku.hk-
dc.identifier.authorityChing, WK=rp00679-
dc.identifier.doi10.1109/BIBM.2016.7822585-
dc.identifier.scopuseid_2-s2.0-85013290468-
dc.identifier.hkuros286184-
dc.identifier.spage584-
dc.identifier.epage591-
dc.publisher.placeUnited States-

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