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Conference Paper: De novo transcriptomic profile in the gonadal tissues of the intertidal whelk Reishia clavigera

TitleDe novo transcriptomic profile in the gonadal tissues of the intertidal whelk Reishia clavigera
Authors
Issue Date2014
PublisherThe Society of Environmental Toxicology and Chemistry (SETAC).
Citation
The 24th Annual Meeting of the SETAC Europe, Basel, Switzerland, 11-15 May 2014, abstract no. 464 How to Cite?
AbstractThe intertidal whelk Reishia clavigera (formerly named as Thais clavigera) is one of the most sensitive species suffering from organotin-associated imposex in their females. However, limited information of mRNA transcriptome has restricted the molecular investigation on such endocrine disruption in this species. By means of Illumina sequencing, we obtained a global de novo transcriptome from the gonadal tissues from both male and female of R. clavigera, with 197,324 assembled transcripts and 151,684 condensed non-redundant transcripts. A blast hit results from the NCBI’s non-redundant molluscan database showed that 28,948 transcripts were successfully annotated with significant matches at an e-value of ≤ 1e-6. Among them, 1,108 transcripts were assigned to a well-defined gene ontology term. This first transcriptomic study on the gonadal tissues of R. clavigera has generated the fundamental information of mRNA transcriptome that paves the path for mechanistic studies of chemical contaminants (e.g., organotins) on this common biomonitor species.
DescriptionConference Theme: Science across bridges, borders and boundaries
Oral presentation
Session Track: Aquatic and terrestrial ecotoxicology
Persistent Identifierhttp://hdl.handle.net/10722/205051

 

DC FieldValueLanguage
dc.contributor.authorHo, KYen_US
dc.contributor.authorLeung, TYen_US
dc.contributor.authorIP, CHen_US
dc.contributor.authorQiu, JWen_US
dc.contributor.authorLeung, KMYen_US
dc.date.accessioned2014-09-20T01:19:58Z-
dc.date.available2014-09-20T01:19:58Z-
dc.date.issued2014en_US
dc.identifier.citationThe 24th Annual Meeting of the SETAC Europe, Basel, Switzerland, 11-15 May 2014, abstract no. 464en_US
dc.identifier.urihttp://hdl.handle.net/10722/205051-
dc.descriptionConference Theme: Science across bridges, borders and boundaries-
dc.descriptionOral presentation-
dc.descriptionSession Track: Aquatic and terrestrial ecotoxicology-
dc.description.abstractThe intertidal whelk Reishia clavigera (formerly named as Thais clavigera) is one of the most sensitive species suffering from organotin-associated imposex in their females. However, limited information of mRNA transcriptome has restricted the molecular investigation on such endocrine disruption in this species. By means of Illumina sequencing, we obtained a global de novo transcriptome from the gonadal tissues from both male and female of R. clavigera, with 197,324 assembled transcripts and 151,684 condensed non-redundant transcripts. A blast hit results from the NCBI’s non-redundant molluscan database showed that 28,948 transcripts were successfully annotated with significant matches at an e-value of ≤ 1e-6. Among them, 1,108 transcripts were assigned to a well-defined gene ontology term. This first transcriptomic study on the gonadal tissues of R. clavigera has generated the fundamental information of mRNA transcriptome that paves the path for mechanistic studies of chemical contaminants (e.g., organotins) on this common biomonitor species.-
dc.languageengen_US
dc.publisherThe Society of Environmental Toxicology and Chemistry (SETAC).-
dc.relation.ispartofAnnual Meeting of the SETAC Europeen_US
dc.titleDe novo transcriptomic profile in the gonadal tissues of the intertidal whelk Reishia clavigeraen_US
dc.typeConference_Paperen_US
dc.identifier.emailHo, KY: kevinho2@hku.hken_US
dc.identifier.emailLeung, TY: ptyleung@hku.hken_US
dc.identifier.emailLeung, KMY: kmyleung@hku.hken_US
dc.identifier.authorityLeung, KMY=rp00733en_US
dc.identifier.hkuros238267en_US
dc.publisher.placeBelgium-

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