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- Publisher Website: 10.1007/s10930-007-9099-7
- Scopus: eid_2-s2.0-35848970354
- PMID: 17763925
- WOS: WOS:000250722600007
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Article: Characterization of His-tagged rat uroporphyrinogen III synthase wild-type and variant enzymes
Title | Characterization of His-tagged rat uroporphyrinogen III synthase wild-type and variant enzymes |
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Authors | |
Keywords | Congenital erythropoetic porphyria spiro mechanism Tetrapyrrole Urogen III synthase Uroporphyrinogen III synthase |
Issue Date | 2007 |
Publisher | Springer New York LLC. The Journal's web site is located at http://springerlink.metapress.com/openurl.asp?genre=journal&issn=1572-3887 |
Citation | Protein Journal, 2007, v. 26 n. 8, p. 569-576 How to Cite? |
Abstract | The structurally related tetrapyrrolic pigments are a group of natural products that participate in many of the fundamental biosynthetic and catabolic processes of living organisms. Urogen III synthase catalyzes a key step in the formation of urogen III, a common intermediate for tetrapyrrolic natural products. In the present study, we cloned, purified, and characterized His-tagged rat urogen III synthase. The mechanism of enzymatic reaction was studied through site-directed mutagenesis of eight highly conserved residues with functional side chains around the active site followed with activity tests. Lys10, Asp17, Glu68, Tyr97, Asn121, Lys147, and His173 have not been studied previously, which were found to be unessential for enzymatic reaction. Tyr168 was identified as an important residue for enzymatic reaction catalyzed by rat urogen III synthase. Molecular modeling suggests the hydroxyl group of Tyr168 side chain is 3.5 Å away from the D ring, and is within hydrogen bond distance (1.9 Å) with acetate side chain of the D ring. © 2007 Springer Science+Business Media, LLC. |
Persistent Identifier | http://hdl.handle.net/10722/168151 |
ISSN | 2023 Impact Factor: 1.9 2023 SCImago Journal Rankings: 0.479 |
ISI Accession Number ID | |
References |
DC Field | Value | Language |
---|---|---|
dc.contributor.author | Li, N | en_US |
dc.contributor.author | Ma, DL | en_US |
dc.contributor.author | Liu, X | en_US |
dc.contributor.author | Wu, L | en_US |
dc.contributor.author | Chu, X | en_US |
dc.contributor.author | Wong, KY | en_US |
dc.contributor.author | Li, D | en_US |
dc.date.accessioned | 2012-10-08T03:15:43Z | - |
dc.date.available | 2012-10-08T03:15:43Z | - |
dc.date.issued | 2007 | en_US |
dc.identifier.citation | Protein Journal, 2007, v. 26 n. 8, p. 569-576 | en_US |
dc.identifier.issn | 1572-3887 | en_US |
dc.identifier.uri | http://hdl.handle.net/10722/168151 | - |
dc.description.abstract | The structurally related tetrapyrrolic pigments are a group of natural products that participate in many of the fundamental biosynthetic and catabolic processes of living organisms. Urogen III synthase catalyzes a key step in the formation of urogen III, a common intermediate for tetrapyrrolic natural products. In the present study, we cloned, purified, and characterized His-tagged rat urogen III synthase. The mechanism of enzymatic reaction was studied through site-directed mutagenesis of eight highly conserved residues with functional side chains around the active site followed with activity tests. Lys10, Asp17, Glu68, Tyr97, Asn121, Lys147, and His173 have not been studied previously, which were found to be unessential for enzymatic reaction. Tyr168 was identified as an important residue for enzymatic reaction catalyzed by rat urogen III synthase. Molecular modeling suggests the hydroxyl group of Tyr168 side chain is 3.5 Å away from the D ring, and is within hydrogen bond distance (1.9 Å) with acetate side chain of the D ring. © 2007 Springer Science+Business Media, LLC. | en_US |
dc.language | eng | en_US |
dc.publisher | Springer New York LLC. The Journal's web site is located at http://springerlink.metapress.com/openurl.asp?genre=journal&issn=1572-3887 | en_US |
dc.relation.ispartof | Protein Journal | en_US |
dc.subject | Congenital erythropoetic porphyria | - |
dc.subject | spiro mechanism | - |
dc.subject | Tetrapyrrole | - |
dc.subject | Urogen III synthase | - |
dc.subject | Uroporphyrinogen III synthase | - |
dc.subject.mesh | Amino Acid Sequence | en_US |
dc.subject.mesh | Animals | en_US |
dc.subject.mesh | Binding Sites | en_US |
dc.subject.mesh | Catalysis | en_US |
dc.subject.mesh | Cloning, Molecular | en_US |
dc.subject.mesh | Crystallography, X-Ray | en_US |
dc.subject.mesh | Gene Library | en_US |
dc.subject.mesh | Histidine - Chemistry | en_US |
dc.subject.mesh | Liver - Enzymology | en_US |
dc.subject.mesh | Models, Molecular | en_US |
dc.subject.mesh | Molecular Sequence Data | en_US |
dc.subject.mesh | Mutagenesis, Site-Directed | en_US |
dc.subject.mesh | Protein Conformation | en_US |
dc.subject.mesh | Rats | en_US |
dc.subject.mesh | Sequence Homology, Amino Acid | en_US |
dc.subject.mesh | Substrate Specificity | en_US |
dc.subject.mesh | Uroporphyrinogen Iii Synthetase - Chemistry - Genetics - Metabolism | en_US |
dc.title | Characterization of His-tagged rat uroporphyrinogen III synthase wild-type and variant enzymes | en_US |
dc.type | Article | en_US |
dc.identifier.email | Ma, DL:edmondma@hku.hk | en_US |
dc.identifier.authority | Ma, DL=rp00760 | en_US |
dc.description.nature | link_to_subscribed_fulltext | en_US |
dc.identifier.doi | 10.1007/s10930-007-9099-7 | en_US |
dc.identifier.pmid | 17763925 | - |
dc.identifier.scopus | eid_2-s2.0-35848970354 | en_US |
dc.relation.references | http://www.scopus.com/mlt/select.url?eid=2-s2.0-35848970354&selection=ref&src=s&origin=recordpage | en_US |
dc.identifier.volume | 26 | en_US |
dc.identifier.issue | 8 | en_US |
dc.identifier.spage | 569 | en_US |
dc.identifier.epage | 576 | en_US |
dc.identifier.isi | WOS:000250722600007 | - |
dc.publisher.place | United States | en_US |
dc.identifier.scopusauthorid | Li, N=36064475400 | en_US |
dc.identifier.scopusauthorid | Ma, DL=7402075538 | en_US |
dc.identifier.scopusauthorid | Liu, X=26428187400 | en_US |
dc.identifier.scopusauthorid | Wu, L=11640415600 | en_US |
dc.identifier.scopusauthorid | Chu, X=7102057236 | en_US |
dc.identifier.scopusauthorid | Wong, KY=7404760030 | en_US |
dc.identifier.scopusauthorid | Li, D=26643209100 | en_US |
dc.identifier.issnl | 1572-3887 | - |