Dataset

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Title of Dataset
Data From: The Forkhead box transcription factor FOXM1 is required for the maintenance of cell proliferation and protection against oxidative stress in human embryonic stem cells
GSE79694: The Forkhead box transcription factor FOXM1 is required for the maintenance of cell proliferation and protection against oxidative stress in human embryonic stem cells
Author of Dataset
Kwok, Chun1
Qin, Yiming1
Contact
Yao, Kwok Ming1
Date of Dataset Creation
2016-03-29
Description
Human embryonic stem cells (hESCs) exhibit unique cell cycle structure, self-renewal and pluripotency. The Forkhead box transcription factor M1 (FOXM1) is critically required for the maintenance of pluripotency in mouse embryonic stem cells and mouse embryonal carcinoma cells, but its role in hESCs remains unclear. Here, we show that FOXM1 expression was enriched in undifferentiated hESCs and was regulated in a cell cycle-dependent manner with peak levels detected at the G2/M phase. Expression of FOXM1 did not correlate with OCT4 and NANOG during in vitro differentiation of hESCs. Importantly, knockdown of FOXM1 expression led to aberrant cell cycle distribution with impairment in mitotic progression but showed no profound effect on the undifferentiated state. Interestingly, FOXM1 depletion sensitized hESCs to oxidative stress. Moreover, genome-wide analysis of FOXM1 targets by ChIP-seq identified genes important for M phase including CCNB1 and CDK1, which were subsequently confirmed by ChIP and RNA interference analyses. Further peak set comparison against a differentiating hESC line and a cancer cell line revealed substantial difference in the genomic binding profile of FOXM1 in hESCs. Taken together, our findings provide the first evidence to support FOXM1 as important regulator of cell cycle progression and defense against oxidative stress in hESCs.
Citation
Yao, KM, Kwok, C, Qin, Y. (2016). Data From: The Forkhead box transcription factor FOXM1 is required for the maintenance of cell proliferation and protection against oxidative stress in human embryonic stem cells . [Data File]. https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE79694
Subject (RGC Codes)
M1 — Biological Sciences — 生物科學
  • 1109 — Genomic Biology — 基因生物學
Subject (ANZSRC)
06 — BIOLOGICAL SCIENCES — 生物科學
  • 0601 — BIOCHEMISTRY AND CELL BIOLOGY — 生物化學和細胞生物學
    • 060199 — Biochemistry and Cell Biology not elsewhere classified
Keyword
Homo sapiens
Affiliations
  1. The University of Hong Kong, School of Biomedical Sciences, Hong Kong, China