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Conference Paper: Partially inverted tandem repeat isolated from pericentric region of chicken chromosome 8

TitlePartially inverted tandem repeat isolated from pericentric region of chicken chromosome 8
Authors
KeywordsChicken
Chromosome
PIR family
Repetitive DNA sequence
Issue Date2002
PublisherSpringer Verlag Dordrecht. The Journal's web site is located at http://springerlink.metapress.com/openurl.asp?genre=journal&issn=0967-3849
Citation
Chromosome Research, 2002, v. 10 n. 1, p. 73-82 How to Cite?
Abstract
The majority of chicken repetitive sequence is nuclear-membrane-associated sequence (CNM), which resides in a large number of microchromosomes (chromosomes 11-39) and is absent from macrochromosomes 1-5, ZW, and some of the intermediate chromosomes 6-10. Two repetitive families, EcoRI/XhoI, are confined to the female-specific W chromosome. The core repeat units of the three families are 21 bp, containing (A)3-5 and (T)3-5 clusters separated by 5-7-bp sequences. In this article, we describe the isolation and initial characterization of a novel repeat family that is related to CNM/EcoRI/XhoI families. The novel family, designated as PIR, consists of multiple types of partially inverted repeat units of about 1.2, 1.4 and 1.6 kb. The PIR sequence is restricted to chicken chromosome 8, and accounts for about 3.8 mb, or 2500 copies of the 1.4-kb units, of the chicken genome. The evolution of PIR and related sequences is discussed.
Persistent Identifierhttp://hdl.handle.net/10722/84783
ISSN
2013 Impact Factor: 2.688
ISI Accession Number ID
References

 

Author Affiliations
  1. The University of Hong Kong
DC FieldValueLanguage
dc.contributor.authorWang, Xen_HK
dc.contributor.authorLi, Jen_HK
dc.contributor.authorLeung, FCen_HK
dc.date.accessioned2010-09-06T08:57:04Z-
dc.date.available2010-09-06T08:57:04Z-
dc.date.issued2002en_HK
dc.identifier.citationChromosome Research, 2002, v. 10 n. 1, p. 73-82en_HK
dc.identifier.issn0967-3849en_HK
dc.identifier.urihttp://hdl.handle.net/10722/84783-
dc.description.abstractThe majority of chicken repetitive sequence is nuclear-membrane-associated sequence (CNM), which resides in a large number of microchromosomes (chromosomes 11-39) and is absent from macrochromosomes 1-5, ZW, and some of the intermediate chromosomes 6-10. Two repetitive families, EcoRI/XhoI, are confined to the female-specific W chromosome. The core repeat units of the three families are 21 bp, containing (A)3-5 and (T)3-5 clusters separated by 5-7-bp sequences. In this article, we describe the isolation and initial characterization of a novel repeat family that is related to CNM/EcoRI/XhoI families. The novel family, designated as PIR, consists of multiple types of partially inverted repeat units of about 1.2, 1.4 and 1.6 kb. The PIR sequence is restricted to chicken chromosome 8, and accounts for about 3.8 mb, or 2500 copies of the 1.4-kb units, of the chicken genome. The evolution of PIR and related sequences is discussed.en_HK
dc.languageengen_HK
dc.publisherSpringer Verlag Dordrecht. The Journal's web site is located at http://springerlink.metapress.com/openurl.asp?genre=journal&issn=0967-3849en_HK
dc.relation.ispartofChromosome Researchen_HK
dc.subjectChickenen_HK
dc.subjectChromosomeen_HK
dc.subjectPIR familyen_HK
dc.subjectRepetitive DNA sequenceen_HK
dc.titlePartially inverted tandem repeat isolated from pericentric region of chicken chromosome 8en_HK
dc.typeConference_Paperen_HK
dc.identifier.openurlhttp://library.hku.hk:4550/resserv?sid=HKU:IR&issn=0967-3849&volume=10&spage=73&epage=82&date=2002&atitle=Partially+inverted+tandem+repeat+isolated+from+pericentric+region+of+chicken+chromosome+8en_HK
dc.identifier.emailLeung, FC: fcleung@hkucc.hku.hken_HK
dc.identifier.authorityLeung, FC=rp00731en_HK
dc.description.naturelink_to_subscribed_fulltext-
dc.identifier.doi10.1023/A:1014226412339en_HK
dc.identifier.pmid11863074en_HK
dc.identifier.scopuseid_2-s2.0-0036164577en_HK
dc.identifier.hkuros66136en_HK
dc.relation.referenceshttp://www.scopus.com/mlt/select.url?eid=2-s2.0-0036164577&selection=ref&src=s&origin=recordpageen_HK
dc.identifier.volume10en_HK
dc.identifier.issue1en_HK
dc.identifier.spage73en_HK
dc.identifier.epage82en_HK
dc.identifier.isiWOS:000173846800009-
dc.publisher.placeNetherlandsen_HK
dc.identifier.scopusauthoridWang, X=8902176100en_HK
dc.identifier.scopusauthoridLi, J=27171035300en_HK
dc.identifier.scopusauthoridLeung, FC=7103078633en_HK

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