File Download
 
Links for fulltext
(May Require Subscription)
 
Supplementary

Conference Paper: Partially inverted tandem repeat isolated from pericentric region of chicken chromosome 8
  • Basic View
  • Metadata View
  • XML View
TitlePartially inverted tandem repeat isolated from pericentric region of chicken chromosome 8
 
AuthorsWang, X1
Li, J1
Leung, FC1
 
KeywordsChicken
Chromosome
PIR family
Repetitive DNA sequence
 
Issue Date2002
 
PublisherSpringer Verlag Dordrecht. The Journal's web site is located at http://springerlink.metapress.com/openurl.asp?genre=journal&issn=0967-3849
 
CitationChromosome Research, 2002, v. 10 n. 1, p. 73-82 [How to Cite?]
DOI: http://dx.doi.org/10.1023/A:1014226412339
 
AbstractThe majority of chicken repetitive sequence is nuclear-membrane-associated sequence (CNM), which resides in a large number of microchromosomes (chromosomes 11-39) and is absent from macrochromosomes 1-5, ZW, and some of the intermediate chromosomes 6-10. Two repetitive families, EcoRI/XhoI, are confined to the female-specific W chromosome. The core repeat units of the three families are 21 bp, containing (A)3-5 and (T)3-5 clusters separated by 5-7-bp sequences. In this article, we describe the isolation and initial characterization of a novel repeat family that is related to CNM/EcoRI/XhoI families. The novel family, designated as PIR, consists of multiple types of partially inverted repeat units of about 1.2, 1.4 and 1.6 kb. The PIR sequence is restricted to chicken chromosome 8, and accounts for about 3.8 mb, or 2500 copies of the 1.4-kb units, of the chicken genome. The evolution of PIR and related sequences is discussed.
 
ISSN0967-3849
2013 Impact Factor: 2.688
 
DOIhttp://dx.doi.org/10.1023/A:1014226412339
 
ISI Accession Number IDWOS:000173846800009
 
ReferencesReferences in Scopus
 
DC FieldValue
dc.contributor.authorWang, X
 
dc.contributor.authorLi, J
 
dc.contributor.authorLeung, FC
 
dc.date.accessioned2010-09-06T08:57:04Z
 
dc.date.available2010-09-06T08:57:04Z
 
dc.date.issued2002
 
dc.description.abstractThe majority of chicken repetitive sequence is nuclear-membrane-associated sequence (CNM), which resides in a large number of microchromosomes (chromosomes 11-39) and is absent from macrochromosomes 1-5, ZW, and some of the intermediate chromosomes 6-10. Two repetitive families, EcoRI/XhoI, are confined to the female-specific W chromosome. The core repeat units of the three families are 21 bp, containing (A)3-5 and (T)3-5 clusters separated by 5-7-bp sequences. In this article, we describe the isolation and initial characterization of a novel repeat family that is related to CNM/EcoRI/XhoI families. The novel family, designated as PIR, consists of multiple types of partially inverted repeat units of about 1.2, 1.4 and 1.6 kb. The PIR sequence is restricted to chicken chromosome 8, and accounts for about 3.8 mb, or 2500 copies of the 1.4-kb units, of the chicken genome. The evolution of PIR and related sequences is discussed.
 
dc.description.naturelink_to_subscribed_fulltext
 
dc.identifier.citationChromosome Research, 2002, v. 10 n. 1, p. 73-82 [How to Cite?]
DOI: http://dx.doi.org/10.1023/A:1014226412339
 
dc.identifier.doihttp://dx.doi.org/10.1023/A:1014226412339
 
dc.identifier.epage82
 
dc.identifier.hkuros66136
 
dc.identifier.isiWOS:000173846800009
 
dc.identifier.issn0967-3849
2013 Impact Factor: 2.688
 
dc.identifier.issue1
 
dc.identifier.openurl
 
dc.identifier.pmid11863074
 
dc.identifier.scopuseid_2-s2.0-0036164577
 
dc.identifier.spage73
 
dc.identifier.urihttp://hdl.handle.net/10722/84783
 
dc.identifier.volume10
 
dc.languageeng
 
dc.publisherSpringer Verlag Dordrecht. The Journal's web site is located at http://springerlink.metapress.com/openurl.asp?genre=journal&issn=0967-3849
 
dc.publisher.placeNetherlands
 
dc.relation.ispartofChromosome Research
 
dc.relation.referencesReferences in Scopus
 
dc.subjectChicken
 
dc.subjectChromosome
 
dc.subjectPIR family
 
dc.subjectRepetitive DNA sequence
 
dc.titlePartially inverted tandem repeat isolated from pericentric region of chicken chromosome 8
 
dc.typeConference_Paper
 
<?xml encoding="utf-8" version="1.0"?>
<item><contributor.author>Wang, X</contributor.author>
<contributor.author>Li, J</contributor.author>
<contributor.author>Leung, FC</contributor.author>
<date.accessioned>2010-09-06T08:57:04Z</date.accessioned>
<date.available>2010-09-06T08:57:04Z</date.available>
<date.issued>2002</date.issued>
<identifier.citation>Chromosome Research, 2002, v. 10 n. 1, p. 73-82</identifier.citation>
<identifier.issn>0967-3849</identifier.issn>
<identifier.uri>http://hdl.handle.net/10722/84783</identifier.uri>
<description.abstract>The majority of chicken repetitive sequence is nuclear-membrane-associated sequence (CNM), which resides in a large number of microchromosomes (chromosomes 11-39) and is absent from macrochromosomes 1-5, ZW, and some of the intermediate chromosomes 6-10. Two repetitive families, EcoRI/XhoI, are confined to the female-specific W chromosome. The core repeat units of the three families are 21 bp, containing (A)3-5 and (T)3-5 clusters separated by 5-7-bp sequences. In this article, we describe the isolation and initial characterization of a novel repeat family that is related to CNM/EcoRI/XhoI families. The novel family, designated as PIR, consists of multiple types of partially inverted repeat units of about 1.2, 1.4 and 1.6 kb. The PIR sequence is restricted to chicken chromosome 8, and accounts for about 3.8 mb, or 2500 copies of the 1.4-kb units, of the chicken genome. The evolution of PIR and related sequences is discussed.</description.abstract>
<language>eng</language>
<publisher>Springer Verlag Dordrecht. The Journal&apos;s web site is located at http://springerlink.metapress.com/openurl.asp?genre=journal&amp;issn=0967-3849</publisher>
<relation.ispartof>Chromosome Research</relation.ispartof>
<subject>Chicken</subject>
<subject>Chromosome</subject>
<subject>PIR family</subject>
<subject>Repetitive DNA sequence</subject>
<title>Partially inverted tandem repeat isolated from pericentric region of chicken chromosome 8</title>
<type>Conference_Paper</type>
<identifier.openurl>http://library.hku.hk:4550/resserv?sid=HKU:IR&amp;issn=0967-3849&amp;volume=10&amp;spage=73&amp;epage=82&amp;date=2002&amp;atitle=Partially+inverted+tandem+repeat+isolated+from+pericentric+region+of+chicken+chromosome+8</identifier.openurl>
<description.nature>link_to_subscribed_fulltext</description.nature>
<identifier.doi>10.1023/A:1014226412339</identifier.doi>
<identifier.pmid>11863074</identifier.pmid>
<identifier.scopus>eid_2-s2.0-0036164577</identifier.scopus>
<identifier.hkuros>66136</identifier.hkuros>
<relation.references>http://www.scopus.com/mlt/select.url?eid=2-s2.0-0036164577&amp;selection=ref&amp;src=s&amp;origin=recordpage</relation.references>
<identifier.volume>10</identifier.volume>
<identifier.issue>1</identifier.issue>
<identifier.spage>73</identifier.spage>
<identifier.epage>82</identifier.epage>
<identifier.isi>WOS:000173846800009</identifier.isi>
<publisher.place>Netherlands</publisher.place>
</item>
Author Affiliations
  1. The University of Hong Kong