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Article: A haplotype map of the human genome

TitleA haplotype map of the human genome
Authors
Belmont, JWBoudreau, ALeal, SMHardenbol, PPasternak, SWheeler, DAWillis, TDYu, FYang, HGao, YHu, HWang, YWang, YXiong, XXu, LWaye, MMYTsui, SKWXue, HWong, JTFGalver, LMBarrett, JSodergren, EFan, JBMurray, SSOliphant, ARChee, MSMontpetit, AChagnon, FFerretti, VLeboeuf, MOlivier, JFPhillips, MSWeinstock, GMFry, BRoumy, SSallée, CVerner, AHudson, TJFrazer, KABallinger, DGCox, DRHinds, DAStuve, LLYakub, IKwok, PYHu, WCai, DKoboldt, DCMiller, RDPawlikowska, LTaillonMiller, PXiao, MTsui, LCMak, WGabriel, SBSham, PCSong, YQMaller, JTam, PKHNakamura, YKawaguchi, TKitamoto, TMorizono, TNagashima, AOhnishi, YOnofrio, RCSekine, ATanaka, TDeloukas, PMcCarroll, SBird, CPDelgado, MDermitzakis, ETPatterson, NPe'er, IPurcell, SZiaugra, LRichter, DJSabeti, PSaxena, RSchaffner, SFVarilly, PLi, CStein, LDKrishnan, LSmith, AVThorisson, GABirren, BWChakravarti, AChen, PECutler, DJKashuk, CSLin, SAbecasis, GRLin, WGuan, WMunro, HMQin, ZSDaly, MJThomas, DJMcVean, GBottolo, LEyheramendy, SFreeman, CMarchini, JMyers, SLiu, SSpencer, CStephens, MWilson, RKDonnelly, PCardon, LRClarke, GEvans, DMMorris, APWeir, BSTsunoda, TMullikin, JCPan, HSherry, STYu, JFeolo, MZhang, HZeng, CZhao, HMatsuda, IFukushima, YMacer, DRSuda, ERotimi, CNTang, XGwilliam, RAdebamowo, CAAjayi, IAniagwu, TMarshall, PANkwodimmah, CRoyal, CDMLeppert, MFDixon, MPeiffer, AQiu, RFulton, LLWang, JKent, AKato, KNiikawa, NAdewole, IFKnoppers, BMFoster, MWClayton, EWWatkin, JGibbs, RARogers, JMuzny, DWang, WNazareth, LBurton, JCarter, NPClee, CMGriffiths, MJones, MCMcLay, KPlumb, RWRoss, MTHunt, SZhang, BSims, SKWilley, DLChen, ZHan, HKang, LGodbout, MWallenburg, JCL'Archevêque, PBellemare, GMorrison, JSaeki, KZhang, QWang, HAn, DFu, HLi, QWang, ZWang, RHolden, ALBrooks, LDPowell, DMcEwen, JEBird, CRZhao, HGuyer, MSNailer, PJWang, VOPeterson, JLShi, MSpiegel, JSung, LMStranger, BEWitonsky, JZacharia, LFCollins, FSZhou, JKennedy, KJamieson, RStewart, JBarry, RBlumenstiel, BCamargo, AWhittaker, PDefelice, MFaggart, MGoyette, MGupta, SMoore, JNguyen, HParkin, MRoy, JStahl, EWinchester, EBentley, DRAltshuler, DShen, YYao, ZHuang, WChu, XHe, YJin, LLiu, YShen, YSun, WDe Bakker, PIWWang, H
Issue Date2005
PublisherNature Publishing Group. The Journal's web site is located at http://www.nature.com/nature
Citation
Nature, 2005, v. 437 n. 7063, p. 1299-1320 How to Cite?
Abstract
Inherited genetic variation has a critical but as yet largely uncharacterized role in human disease. Here we report a public database of common variation in the human genome: more than one million single nucleotide polymorphisms (SNPs) for which accurate and complete genotypes have been obtained in 269 DNA samples from four populations, including ten 500-kilobase regions in which essentially all information about common DNA variation has been extracted. These data document the generality of recombination hotspots, a block-like structure of linkage disequilibrium and low haplotype diversity, leading to substantial correlations of SNPs with many of their neighbours. We show how the HapMap resource can guide the design and analysis of genetic association studies, shed light on structural variation and recombination, and identify loci that may have been subject to natural selection during human evolution. © 2005 Nature Publishing Group.
Persistent Identifierhttp://hdl.handle.net/10722/81471
ISSN
2013 Impact Factor: 42.351
PubMed Central ID
ISI Accession Number ID
References

 

Author Affiliations
  1. Scientific and Cultural Organization Bangkok
  2. Beijing Normal University
  3. University of California, San Francisco
  4. Baylor College of Medicine
  5. Chinese Academy of Social Sciences
  6. Massachusetts General Hospital
  7. Cold Spring Harbor Laboratory
  8. National Human Genome Research Institute
  9. Wellcome Trust
  10. University of Tsukuba
  11. Japan Ministry of Education, Culture, Sports, Science and Technology
  12. University of Oklahoma
  13. Nagasaki University
  14. Perlegen Sciences, Inc.
  15. Chinese National Human Genome Center at Shanghai
  16. Solexa Ltd.
  17. The University of Hong Kong
  18. Human Genetic Resource Administration of China
  19. SNP Consortium
  20. Howard University
  21. University of Ibadan
  22. Riken
  23. North Carolina State University
  24. Wellcome Trust Centre for Human Genetics
  25. Wellcome Trust Sanger Institute
  26. null
  27. Prognosys Biosciences Inc.
  28. Institute of Medical Science The University of Tokyo
  29. Novartis Pharma
  30. Chinese Academy of Sciences
  31. National Center for Biotechnology Information
  32. University of Maryland, Baltimore
  33. Health Sciences University of Hokkaido
  34. Washington University in St. Louis School of Medicine
  35. Genetic Interest Group
  36. University of Michigan School of Public Health
  37. Kyoto University
  38. ParAllele BioScience
  39. Hong Kong University of Science and Technology
  40. University of Oxford
  41. University of Utah Health Sciences Center
  42. Case Western Reserve University
  43. null
  44. University of California, Santa Cruz
  45. Vanderbilt University
  46. University of Washington Seattle
  47. Shinshu University Faculty of Medicine
  48. The Johns Hopkins School of Medicine
  49. Illumina, Inc.
  50. Chinese University of Hong Kong
  51. National Institutes of Health, Bethesda
  52. McGill University
  53. Basic Research Service of the Ministry of Science and Technology of the P. R. China
  54. Frost & Sullivan
  55. Broad Institute
  56. Université de Montréal
DC FieldValueLanguage
dc.contributor.authorBelmont, JWen_HK
dc.contributor.authorBoudreau, Aen_HK
dc.contributor.authorLeal, SMen_HK
dc.contributor.authorHardenbol, Pen_HK
dc.contributor.authorPasternak, Sen_HK
dc.contributor.authorWheeler, DAen_HK
dc.contributor.authorWillis, TDen_HK
dc.contributor.authorYu, Fen_HK
dc.contributor.authorYang, Hen_HK
dc.contributor.authorGao, Yen_HK
dc.contributor.authorHu, Hen_HK
dc.contributor.authorWang, Yen_HK
dc.contributor.authorWang, Yen_HK
dc.contributor.authorXiong, Xen_HK
dc.contributor.authorXu, Len_HK
dc.contributor.authorWaye, MMYen_HK
dc.contributor.authorTsui, SKWen_HK
dc.contributor.authorXue, Hen_HK
dc.contributor.authorWong, JTFen_HK
dc.contributor.authorGalver, LMen_HK
dc.contributor.authorBarrett, Jen_HK
dc.contributor.authorSodergren, Een_HK
dc.contributor.authorFan, JBen_HK
dc.contributor.authorMurray, SSen_HK
dc.contributor.authorOliphant, ARen_HK
dc.contributor.authorChee, MSen_HK
dc.contributor.authorMontpetit, Aen_HK
dc.contributor.authorChagnon, Fen_HK
dc.contributor.authorFerretti, Ven_HK
dc.contributor.authorLeboeuf, Men_HK
dc.contributor.authorOlivier, JFen_HK
dc.contributor.authorPhillips, MSen_HK
dc.contributor.authorWeinstock, GMen_HK
dc.contributor.authorFry, Ben_HK
dc.contributor.authorRoumy, Sen_HK
dc.contributor.authorSallée, Cen_HK
dc.contributor.authorVerner, Aen_HK
dc.contributor.authorHudson, TJen_HK
dc.contributor.authorFrazer, KAen_HK
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dc.contributor.authorJin, Len_HK
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dc.date.accessioned2010-09-06T08:18:10Z-
dc.date.available2010-09-06T08:18:10Z-
dc.date.issued2005en_HK
dc.identifier.citationNature, 2005, v. 437 n. 7063, p. 1299-1320en_HK
dc.identifier.issn0028-0836en_HK
dc.identifier.urihttp://hdl.handle.net/10722/81471-
dc.description.abstractInherited genetic variation has a critical but as yet largely uncharacterized role in human disease. Here we report a public database of common variation in the human genome: more than one million single nucleotide polymorphisms (SNPs) for which accurate and complete genotypes have been obtained in 269 DNA samples from four populations, including ten 500-kilobase regions in which essentially all information about common DNA variation has been extracted. These data document the generality of recombination hotspots, a block-like structure of linkage disequilibrium and low haplotype diversity, leading to substantial correlations of SNPs with many of their neighbours. We show how the HapMap resource can guide the design and analysis of genetic association studies, shed light on structural variation and recombination, and identify loci that may have been subject to natural selection during human evolution. © 2005 Nature Publishing Group.en_HK
dc.languageengen_HK
dc.publisherNature Publishing Group. The Journal's web site is located at http://www.nature.com/natureen_HK
dc.relation.ispartofNatureen_HK
dc.subject.meshChromosomes, Human, Y - genetics-
dc.subject.meshDNA, Mitochondrial - genetics-
dc.subject.meshGenome, Human-
dc.subject.meshHaplotypes - genetics-
dc.subject.meshPolymorphism, Single Nucleotide - genetics-
dc.titleA haplotype map of the human genomeen_HK
dc.typeArticleen_HK
dc.identifier.openurlhttp://library.hku.hk:4550/resserv?sid=HKU:IR&issn=0028-0836&volume=437&issue=7063&spage=1299&epage=1320&date=2005&atitle=A+haplotype+map+of+the+human+genome+(Co-PI+of+Hong+Kong+Centre+which+responsible+for+2.5%+of+genome)en_HK
dc.identifier.emailTsui, LC: tsuilc@hkucc.hku.hken_HK
dc.identifier.emailSham, PC: pcsham@hku.hken_HK
dc.identifier.emailSong, YQ: songy@hku.hken_HK
dc.identifier.emailTam, PKH: paultam@hku.hken_HK
dc.identifier.authorityTsui, LC=rp00058en_HK
dc.identifier.authoritySham, PC=rp00459en_HK
dc.identifier.authoritySong, YQ=rp00488en_HK
dc.identifier.authorityTam, PKH=rp00060en_HK
dc.description.naturelink_to_OA_fulltext-
dc.identifier.doi10.1038/nature04226en_HK
dc.identifier.pmid16255080-
dc.identifier.pmcidPMC1880871-
dc.identifier.scopuseid_2-s2.0-79959524146en_HK
dc.identifier.hkuros110731en_HK
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dc.identifier.volume437en_HK
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dc.publisher.placeUnited Kingdomen_HK
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dc.identifier.citeulike366486-

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