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- Publisher Website: 10.1080/23802359.2016.1261610
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Article: Comparative mitogenomic and phylogenetic characterization on the complete mitogenomes of Talaromyces (Penicillium) marneffei
Title | Comparative mitogenomic and phylogenetic characterization on the complete mitogenomes of Talaromyces (Penicillium) marneffei |
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Authors | |
Keywords | Mitogenome Talaromyces marneffei Penicillium marneffei Phylogeny Comparative genomics |
Issue Date | 2017 |
Publisher | Taylor & Francis. The Journal's web site is located at http://www.tandfonline.com/toc/tmdn20/current |
Citation | Mitochondrial DNA Part B, 2017, v. 1 n. 1, p. 941-942 How to Cite? |
Abstract | We report the complete mitochondrial DNA (mtDNA) sequences of four Talaromyces marneffei strains and performed comparative genomic and phylogenetic analyses. The gene orders of the four mtDNAs are identical to the previously published mtDNA of strain PM1 (nad4l, nad5, nad2, atp9, cob, nad1, nad4, atp8, atp6, nad6, cox3, rps, cox1, nad3, cox2). Phylogenetic analysis showed that the four mtDNAs were clustered with that of PM1 with high bootstrap support. Compared to mtDNA of PM1, the only non-synonymous mutation was located in nad2 (T505M) of strain PM26. Synonymous single nucleotide polymorphisms were observed at eight positions in the four mtDNAs. |
Persistent Identifier | http://hdl.handle.net/10722/258657 |
ISSN | 2023 Impact Factor: 0.5 2023 SCImago Journal Rankings: 0.286 |
ISI Accession Number ID |
DC Field | Value | Language |
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dc.contributor.author | Tam, WT | - |
dc.contributor.author | Tsang, CC | - |
dc.contributor.author | Lau, SKP | - |
dc.contributor.author | Woo, PCY | - |
dc.date.accessioned | 2018-08-22T01:41:57Z | - |
dc.date.available | 2018-08-22T01:41:57Z | - |
dc.date.issued | 2017 | - |
dc.identifier.citation | Mitochondrial DNA Part B, 2017, v. 1 n. 1, p. 941-942 | - |
dc.identifier.issn | 2380-2359 | - |
dc.identifier.uri | http://hdl.handle.net/10722/258657 | - |
dc.description.abstract | We report the complete mitochondrial DNA (mtDNA) sequences of four Talaromyces marneffei strains and performed comparative genomic and phylogenetic analyses. The gene orders of the four mtDNAs are identical to the previously published mtDNA of strain PM1 (nad4l, nad5, nad2, atp9, cob, nad1, nad4, atp8, atp6, nad6, cox3, rps, cox1, nad3, cox2). Phylogenetic analysis showed that the four mtDNAs were clustered with that of PM1 with high bootstrap support. Compared to mtDNA of PM1, the only non-synonymous mutation was located in nad2 (T505M) of strain PM26. Synonymous single nucleotide polymorphisms were observed at eight positions in the four mtDNAs. | - |
dc.language | eng | - |
dc.publisher | Taylor & Francis. The Journal's web site is located at http://www.tandfonline.com/toc/tmdn20/current | - |
dc.relation.ispartof | Mitochondrial DNA Part B | - |
dc.rights | This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License. | - |
dc.subject | Mitogenome | - |
dc.subject | Talaromyces marneffei | - |
dc.subject | Penicillium marneffei | - |
dc.subject | Phylogeny | - |
dc.subject | Comparative genomics | - |
dc.title | Comparative mitogenomic and phylogenetic characterization on the complete mitogenomes of Talaromyces (Penicillium) marneffei | - |
dc.type | Article | - |
dc.identifier.email | Tsang, CC: microbioct@connect.hku.hk | - |
dc.identifier.email | Lau, SKP: skplau@hkucc.hku.hk | - |
dc.identifier.email | Woo, PCY: pcywoo@hkucc.hku.hk | - |
dc.identifier.authority | Tsang, CC=rp02492 | - |
dc.identifier.authority | Lau, SKP=rp00486 | - |
dc.identifier.authority | Woo, PCY=rp00430 | - |
dc.description.nature | published_or_final_version | - |
dc.identifier.doi | 10.1080/23802359.2016.1261610 | - |
dc.identifier.scopus | eid_2-s2.0-85020924122 | - |
dc.identifier.hkuros | 287283 | - |
dc.identifier.hkuros | 271033 | - |
dc.identifier.volume | 1 | - |
dc.identifier.issue | 1 | - |
dc.identifier.spage | 941 | - |
dc.identifier.epage | 942 | - |
dc.identifier.isi | WOS:000402041200419 | - |
dc.publisher.place | United Kingdom | - |
dc.identifier.issnl | 2380-2359 | - |