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Book Chapter: Short Read Mapping for Exome Sequencing

TitleShort Read Mapping for Exome Sequencing
Authors
Issue Date18-Sep-2013
PublisherHumana Press
Citation
Short Read Mapping for Exome Sequencing. In Shomorn, N (Ed.), Deep Sequencing Data Analysis, p. 93-111. New York: Humana Press How to Cite?
AbstractMapping short reads to the reference genome is very often the prerequisite for applications utilizing the next-generation sequencing technologies. A dozen of software tools developed for this purpose have been widely used. But many practical issues remained when utilizing them to build a computational pipeline for downstream analyses. In this chapter, we describe the read mapping procedures adopted in our lab for the exome sequencing studies as an example to illustrate those practical details.
Persistent Identifierhttp://hdl.handle.net/10722/191029
ISBN
Series/Report no.Methods in molecular biology, 1038

 

DC FieldValueLanguage
dc.contributor.authorZhou, Xen_US
dc.contributor.authorBao, Sen_US
dc.contributor.authorWang, BBen_US
dc.contributor.authorZhang, Xen_US
dc.contributor.authorSong, Yen_US
dc.date.accessioned2013-09-17T16:09:59Z-
dc.date.available2013-09-17T16:09:59Z-
dc.date.issued2013-09-18-
dc.identifier.citationShort Read Mapping for Exome Sequencing. In Shomorn, N (Ed.), Deep Sequencing Data Analysis, p. 93-111. New York: Humana Pressen_US
dc.identifier.isbn9781627035132en_US
dc.identifier.urihttp://hdl.handle.net/10722/191029-
dc.description.abstractMapping short reads to the reference genome is very often the prerequisite for applications utilizing the next-generation sequencing technologies. A dozen of software tools developed for this purpose have been widely used. But many practical issues remained when utilizing them to build a computational pipeline for downstream analyses. In this chapter, we describe the read mapping procedures adopted in our lab for the exome sequencing studies as an example to illustrate those practical details.-
dc.languageengen_US
dc.publisherHumana Pressen_US
dc.relation.ispartofDeep Sequencing Data Analysisen_US
dc.relation.ispartofseriesMethods in molecular biology, 1038-
dc.titleShort Read Mapping for Exome Sequencingen_US
dc.typeBook_Chapteren_US
dc.identifier.emailSong, Y: songy@hku.hken_US
dc.identifier.authoritySong, Y=rp00488en_US
dc.identifier.doi10.1007/978-1-62703-514-9_6-
dc.identifier.pmid23872971-
dc.identifier.hkuros222274en_US
dc.identifier.hkuros228250-
dc.identifier.spage93en_US
dc.identifier.epage111en_US
dc.publisher.placeNew York-

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