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Article: Spatial distribution and abundances of ammonia-oxidizing archaea (AOA) and ammonia-oxidizing bacteria (AOB) in mangrove sediments
Title | Spatial distribution and abundances of ammonia-oxidizing archaea (AOA) and ammonia-oxidizing bacteria (AOB) in mangrove sediments | ||||||||||||
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Authors | |||||||||||||
Keywords | Abundance Ammonia-oxidizing archaea (AOA) Ammonia-oxidizing bacteria (AOB) Anammox Community structures Diversity hzo gene Mangrove sediments | ||||||||||||
Issue Date | 2011 | ||||||||||||
Publisher | Springer. The Journal's web site is located at http://link.springer.de/link/service/journals/00253/index.htm | ||||||||||||
Citation | Applied Microbiology And Biotechnology, 2011, v. 89 n. 4, p. 1243-1254 How to Cite? | ||||||||||||
Abstract | We investigated the diversity, spatial distribution, and abundances of ammonia-oxidizing archaea (AOA) and ammonia-oxidizing bacteria (AOB) in sediment samples of different depths collected from a transect with different distances to mangrove forest in the territories of Hong Kong. Both the archaeal and bacterial amoA genes (encoding ammonia monooxygenase subunit A) from all samples supported distinct phylogenetic groups, indicating the presences of niche-specific AOA and AOB in mangrove sediments. The higher AOB abundances than AOA in mangrove sediments, especially in the vicinity of the mangrove trees, might indicate the more important role of AOB on nitrification. The spatial distribution showed that AOA had higher diversity and abundance in the surface layer sediments near the mangrove trees (0 and 10 m) but lower away from the mangrove trees (1,000 m), and communities of AOA could be clustered into surface and bottom sediment layer groups. In contrast, AOB showed a reverse distributed pattern, and its communities were grouped by the distances between sites and mangrove trees, indicating mangrove trees might have different influences on AOA and AOB community structures. Furthermore, the strong correlations among archaeal and bacterial amoA gene abundances and their ratio with NH 4 + , salinity, and pH of sediments indicated that these environmental factors have strong influences on AOA and AOB distributions in mangrove sediments. In addition, AOA diversity and abundances were significantly correlated with hzo gene abundances, which encodes the key enzyme for transformation of hydrazine into N 2 in anaerobic ammonium-oxidizing (anammox) bacteria, indicating AOA and anammox bacteria may interact with each other or they are influenced by the same controlling factors, such as NH 4 + . The results provide a better understanding on using mangrove wetlands as biological treatment systems for removal of nutrients. © 2011 Springer-Verlag. | ||||||||||||
Persistent Identifier | http://hdl.handle.net/10722/145037 | ||||||||||||
ISSN | 2023 Impact Factor: 3.9 2023 SCImago Journal Rankings: 0.957 | ||||||||||||
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Funding Information: This research was supported in part by grants from Agriculture, Fisheries, and Conservation Department of the Hong Kong SAR Government, and Faculty of Science on Sustainable Water at The University of Hong Kong (to J-DG); National Natural Science Foundation of China (3080032), Knowledge Innovation Key Project of The Chinese Academy of Sciences (KZCX2-YW-QN207), Guangdong Province Natural Science Foundation (84510301001692), and a start-up fund for Excellent Scholarship of the Chinese Academy of Sciences (07YQ091001) (to Y-GH). We would like to thank Jessie Lai for laboratory support at The University of Hong Kong. | ||||||||||||
References |
DC Field | Value | Language |
---|---|---|
dc.contributor.author | Li, M | en_HK |
dc.contributor.author | Cao, H | en_HK |
dc.contributor.author | Hong, Y | en_HK |
dc.contributor.author | Gu, JD | en_HK |
dc.date.accessioned | 2012-02-21T05:43:05Z | - |
dc.date.available | 2012-02-21T05:43:05Z | - |
dc.date.issued | 2011 | en_HK |
dc.identifier.citation | Applied Microbiology And Biotechnology, 2011, v. 89 n. 4, p. 1243-1254 | en_HK |
dc.identifier.issn | 0175-7598 | en_HK |
dc.identifier.uri | http://hdl.handle.net/10722/145037 | - |
dc.description.abstract | We investigated the diversity, spatial distribution, and abundances of ammonia-oxidizing archaea (AOA) and ammonia-oxidizing bacteria (AOB) in sediment samples of different depths collected from a transect with different distances to mangrove forest in the territories of Hong Kong. Both the archaeal and bacterial amoA genes (encoding ammonia monooxygenase subunit A) from all samples supported distinct phylogenetic groups, indicating the presences of niche-specific AOA and AOB in mangrove sediments. The higher AOB abundances than AOA in mangrove sediments, especially in the vicinity of the mangrove trees, might indicate the more important role of AOB on nitrification. The spatial distribution showed that AOA had higher diversity and abundance in the surface layer sediments near the mangrove trees (0 and 10 m) but lower away from the mangrove trees (1,000 m), and communities of AOA could be clustered into surface and bottom sediment layer groups. In contrast, AOB showed a reverse distributed pattern, and its communities were grouped by the distances between sites and mangrove trees, indicating mangrove trees might have different influences on AOA and AOB community structures. Furthermore, the strong correlations among archaeal and bacterial amoA gene abundances and their ratio with NH 4 + , salinity, and pH of sediments indicated that these environmental factors have strong influences on AOA and AOB distributions in mangrove sediments. In addition, AOA diversity and abundances were significantly correlated with hzo gene abundances, which encodes the key enzyme for transformation of hydrazine into N 2 in anaerobic ammonium-oxidizing (anammox) bacteria, indicating AOA and anammox bacteria may interact with each other or they are influenced by the same controlling factors, such as NH 4 + . The results provide a better understanding on using mangrove wetlands as biological treatment systems for removal of nutrients. © 2011 Springer-Verlag. | en_HK |
dc.language | eng | en_US |
dc.publisher | Springer. The Journal's web site is located at http://link.springer.de/link/service/journals/00253/index.htm | en_HK |
dc.relation.ispartof | Applied Microbiology and Biotechnology | en_HK |
dc.rights | The Author(s) | en_US |
dc.rights | This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License. | en_US |
dc.subject | Abundance | en_HK |
dc.subject | Ammonia-oxidizing archaea (AOA) | en_HK |
dc.subject | Ammonia-oxidizing bacteria (AOB) | en_HK |
dc.subject | Anammox | en_HK |
dc.subject | Community structures | en_HK |
dc.subject | Diversity | en_HK |
dc.subject | hzo gene | en_HK |
dc.subject | Mangrove sediments | en_HK |
dc.subject.mesh | Ammonia - metabolism | - |
dc.subject.mesh | Archaea - classification - isolation and purification | - |
dc.subject.mesh | Bacteria - classification - isolation and purification | - |
dc.subject.mesh | Biodiversity | - |
dc.subject.mesh | Soil Microbiology | - |
dc.title | Spatial distribution and abundances of ammonia-oxidizing archaea (AOA) and ammonia-oxidizing bacteria (AOB) in mangrove sediments | en_HK |
dc.type | Article | en_HK |
dc.identifier.openurl | http://library.hku.hk:4551/resserv?sid=springerlink&genre=article&atitle=Spatial distribution and abundances of ammonia-oxidizing archaea (AOA) and ammonia-oxidizing bacteria (AOB) in mangrove sediments&title=Applied Microbiology and Biotechnology&issn=01757598&date=2011-02-01&volume=89&issue=4& spage=1243&authors=Meng Li, Huiluo Cao, Yiguo Hong, <i>et al.</i> | en_US |
dc.identifier.email | Gu, JD: jdgu@hkucc.hku.hk | en_HK |
dc.identifier.authority | Gu, JD=rp00701 | en_HK |
dc.description.nature | published_or_final_version | en_US |
dc.identifier.doi | 10.1007/s00253-010-2929-0 | en_HK |
dc.identifier.pmid | 20953601 | - |
dc.identifier.pmcid | PMC3035804 | - |
dc.identifier.scopus | eid_2-s2.0-79952532923 | en_HK |
dc.identifier.hkuros | 194841 | - |
dc.relation.references | http://www.scopus.com/mlt/select.url?eid=2-s2.0-79952532923&selection=ref&src=s&origin=recordpage | en_HK |
dc.identifier.volume | 89 | en_HK |
dc.identifier.issue | 4 | en_HK |
dc.identifier.spage | 1243 | en_HK |
dc.identifier.epage | 1254 | en_HK |
dc.identifier.eissn | 1432-0614 | en_US |
dc.identifier.isi | WOS:000287143600036 | - |
dc.publisher.place | Germany | en_HK |
dc.description.other | Springer Open Choice, 21 Feb 2012 | en_US |
dc.identifier.scopusauthorid | Li, M=35210975800 | en_HK |
dc.identifier.scopusauthorid | Cao, H=37018049400 | en_HK |
dc.identifier.scopusauthorid | Hong, Y=7403393244 | en_HK |
dc.identifier.scopusauthorid | Gu, JD=7403129601 | en_HK |
dc.identifier.citeulike | 8064617 | - |
dc.identifier.issnl | 0175-7598 | - |