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Article: Disturbance analysis of nonlinear differential equation models of genetic SUM regulatory networks
Title | Disturbance analysis of nonlinear differential equation models of genetic SUM regulatory networks | ||||
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Authors | |||||
Keywords | asymptotic stability Disturbance attenuation genetic regulatory network systems biology time delay. | ||||
Issue Date | 2011 | ||||
Publisher | IEEE. | ||||
Citation | Ieee/Acm Transactions On Computational Biology And Bioinformatics, 2011, v. 8 n. 1, p. 253-259 How to Cite? | ||||
Abstract | Noise disturbances and time delays are frequently met in cellular genetic regulatory systems. This paper is concerned with the disturbance analysis of a class of genetic regulatory networks described by nonlinear differential equation models. The mechanisms of genetic regulatory networks to amplify (attenuate) external disturbance are explored, and a simple measure of the amplification (attenuation) level is developed from a nonlinear robust control point of view. It should be noted that the conditions used to measure the disturbance level are delay-independent or delay-dependent, and are expressed within the framework of linear matrix inequalities, which can be characterized as convex optimization, and computed by the interior-point algorithm easily. Finally, by the proposed method, a numerical example is provided to illustrate how to measure the attenuation of proteins in the presence of external disturbances. © 2011 IEEE. | ||||
Persistent Identifier | http://hdl.handle.net/10722/139420 | ||||
ISSN | 2023 Impact Factor: 3.6 2023 SCImago Journal Rankings: 0.794 | ||||
ISI Accession Number ID |
Funding Information: The authors would like to thank the editor-in-chief, the associate editor, and the anonymous reviewers for their constructive comments and suggestions to improve the quality of the paper. The work was partially supported by GRF HKU 7138/10E. | ||||
References |
DC Field | Value | Language |
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dc.contributor.author | Li, P | en_HK |
dc.contributor.author | Lam, J | en_HK |
dc.date.accessioned | 2011-09-23T05:49:18Z | - |
dc.date.available | 2011-09-23T05:49:18Z | - |
dc.date.issued | 2011 | en_HK |
dc.identifier.citation | Ieee/Acm Transactions On Computational Biology And Bioinformatics, 2011, v. 8 n. 1, p. 253-259 | en_HK |
dc.identifier.issn | 1545-5963 | en_HK |
dc.identifier.uri | http://hdl.handle.net/10722/139420 | - |
dc.description.abstract | Noise disturbances and time delays are frequently met in cellular genetic regulatory systems. This paper is concerned with the disturbance analysis of a class of genetic regulatory networks described by nonlinear differential equation models. The mechanisms of genetic regulatory networks to amplify (attenuate) external disturbance are explored, and a simple measure of the amplification (attenuation) level is developed from a nonlinear robust control point of view. It should be noted that the conditions used to measure the disturbance level are delay-independent or delay-dependent, and are expressed within the framework of linear matrix inequalities, which can be characterized as convex optimization, and computed by the interior-point algorithm easily. Finally, by the proposed method, a numerical example is provided to illustrate how to measure the attenuation of proteins in the presence of external disturbances. © 2011 IEEE. | en_HK |
dc.language | eng | en_US |
dc.publisher | IEEE. | - |
dc.relation.ispartof | IEEE/ACM Transactions on Computational Biology and Bioinformatics | en_HK |
dc.rights | ©2011 IEEE. Personal use of this material is permitted. Permission from IEEE must be obtained for all other uses, in any current or future media, including reprinting/republishing this material for advertising or promotional purposes, creating new collective works, for resale or redistribution to servers or lists, or reuse of any copyrighted component of this work in other works. | - |
dc.subject | asymptotic stability | en_HK |
dc.subject | Disturbance attenuation | en_HK |
dc.subject | genetic regulatory network | en_HK |
dc.subject | systems biology | en_HK |
dc.subject | time delay. | en_HK |
dc.title | Disturbance analysis of nonlinear differential equation models of genetic SUM regulatory networks | en_HK |
dc.type | Article | en_HK |
dc.identifier.openurl | http://library.hku.hk:4550/resserv?sid=HKU:IR&issn=1545-5963&volume=8&issue=1&spage=253&epage=259&date=2011&atitle=Disturbance+analysis+of+nonlinear+differential+equation+models+of+genetic+SUM+regulatory+networks | - |
dc.identifier.email | Lam, J:james.lam@hku.hk | en_HK |
dc.identifier.authority | Lam, J=rp00133 | en_HK |
dc.description.nature | published_or_final_version | - |
dc.identifier.doi | 10.1109/TCBB.2010.19 | en_HK |
dc.identifier.pmid | 21071813 | - |
dc.identifier.scopus | eid_2-s2.0-78449310052 | en_HK |
dc.identifier.hkuros | 196455 | en_US |
dc.relation.references | http://www.scopus.com/mlt/select.url?eid=2-s2.0-78449310052&selection=ref&src=s&origin=recordpage | en_HK |
dc.identifier.volume | 8 | en_HK |
dc.identifier.issue | 1 | en_HK |
dc.identifier.spage | 253 | en_HK |
dc.identifier.epage | 259 | en_HK |
dc.identifier.isi | WOS:000283926400023 | - |
dc.publisher.place | United States | en_HK |
dc.identifier.scopusauthorid | Li, P=35069715100 | en_HK |
dc.identifier.scopusauthorid | Lam, J=7201973414 | en_HK |
dc.identifier.issnl | 1545-5963 | - |