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- Publisher Website: 10.1007/s10295-009-0552-9
- Scopus: eid_2-s2.0-67649103626
- PMID: 19277741
- WOS: WOS:000266385900002
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Article: Morphological quantification of filamentous fungal development using membrane immobilization and automatic image analysis
Title | Morphological quantification of filamentous fungal development using membrane immobilization and automatic image analysis | ||||
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Authors | |||||
Keywords | Automatic image analysis Fungal morphology Growth kinetics Membrane immobilization Solid-state fermentation | ||||
Issue Date | 2009 | ||||
Publisher | Springer Verlag. | ||||
Citation | Journal Of Industrial Microbiology And Biotechnology, 2009, v. 36 n. 6, p. 787-800 How to Cite? | ||||
Abstract | Mycelial morphology is a critically important process property in industrial fermentations of filamentous micro-organisms, as particular phenotypes are associated with maximum productivity. However, the accurate quantification of complex morphologies still represents a significant challenge in elucidating this relationship. A system has been developed for high-resolution characterisation of filamentous fungal growth on a solid substrate, using membrane immobilization and fully-automatic plug-ins developed for the public domain, Java-based, image-processing software, ImageJ. The system has been used to quantify the microscopic development of Aspergillus oryzae on malt agar, by measuring spore projected area and circularity, the total length of a hyphal element, the number of tips per element, and the hyphal growth unit. Two different stages of growth are described, from the swelling of a population of conidiospores up to fully developed, branched hyphae 24 h after inoculation. Spore swelling expressed as an increase in mean equivalent spore diameter was found to be approximately linear with time. Widespread germination of spores was observed by 8 h after inoculation. From approximately 12 h, the number of tips was found to increase exponentially. The specific growth rate of a population of hyphae was calculated as approximately 0.24-0.27 h -1. A wide variation in growth kinetics was found within the population. The robustness of the image-analysis system was verified by testing the effect of small variations in the input data. © 2009 Society for Industrial Microbiology. | ||||
Persistent Identifier | http://hdl.handle.net/10722/136354 | ||||
ISSN | 2023 Impact Factor: 3.2 2023 SCImago Journal Rankings: 0.746 | ||||
ISI Accession Number ID |
Funding Information: This work has been supported by a grant from the Technological Sector Research, Strand 1 Postgraduate R&D Skills Programme. We thank P. Taylor for her technical assistance in this study. |
DC Field | Value | Language |
---|---|---|
dc.contributor.author | Barry, DJ | en_HK |
dc.contributor.author | Chan, C | en_HK |
dc.contributor.author | Williams, GA | en_HK |
dc.date.accessioned | 2011-07-27T02:14:14Z | - |
dc.date.available | 2011-07-27T02:14:14Z | - |
dc.date.issued | 2009 | en_HK |
dc.identifier.citation | Journal Of Industrial Microbiology And Biotechnology, 2009, v. 36 n. 6, p. 787-800 | en_HK |
dc.identifier.issn | 1367-5435 | en_HK |
dc.identifier.uri | http://hdl.handle.net/10722/136354 | - |
dc.description.abstract | Mycelial morphology is a critically important process property in industrial fermentations of filamentous micro-organisms, as particular phenotypes are associated with maximum productivity. However, the accurate quantification of complex morphologies still represents a significant challenge in elucidating this relationship. A system has been developed for high-resolution characterisation of filamentous fungal growth on a solid substrate, using membrane immobilization and fully-automatic plug-ins developed for the public domain, Java-based, image-processing software, ImageJ. The system has been used to quantify the microscopic development of Aspergillus oryzae on malt agar, by measuring spore projected area and circularity, the total length of a hyphal element, the number of tips per element, and the hyphal growth unit. Two different stages of growth are described, from the swelling of a population of conidiospores up to fully developed, branched hyphae 24 h after inoculation. Spore swelling expressed as an increase in mean equivalent spore diameter was found to be approximately linear with time. Widespread germination of spores was observed by 8 h after inoculation. From approximately 12 h, the number of tips was found to increase exponentially. The specific growth rate of a population of hyphae was calculated as approximately 0.24-0.27 h -1. A wide variation in growth kinetics was found within the population. The robustness of the image-analysis system was verified by testing the effect of small variations in the input data. © 2009 Society for Industrial Microbiology. | en_HK |
dc.language | eng | en_US |
dc.publisher | Springer Verlag. | en_US |
dc.relation.ispartof | Journal of Industrial Microbiology and Biotechnology | en_HK |
dc.rights | The original publication is available at www.springerlink.com | - |
dc.subject | Automatic image analysis | - |
dc.subject | Fungal morphology | - |
dc.subject | Growth kinetics | - |
dc.subject | Membrane immobilization | - |
dc.subject | Solid-state fermentation | - |
dc.subject.mesh | Aspergillus oryzae - chemistry - growth and development | - |
dc.subject.mesh | Culture Techniques | - |
dc.subject.mesh | Image Processing, Computer-Assisted | - |
dc.subject.mesh | Membranes, Artificial | - |
dc.subject.mesh | Spores, Fungal - chemistry - growth and development | - |
dc.title | Morphological quantification of filamentous fungal development using membrane immobilization and automatic image analysis | en_HK |
dc.type | Article | en_HK |
dc.identifier.openurl | http://library.hku.hk:4550/resserv?sid=HKU:IR&issn=1367-5435&volume=36&issue=6&spage=787&epage=800&date=2009&atitle=Morphological+quantification+of+filamentous+fungal+development+using+membrane+immobilization+and+automatic+image+analysis | en_US |
dc.identifier.email | Chan, C:cecilia.chan@caut.hku.hk | en_HK |
dc.identifier.authority | Chan, C=rp00892 | en_HK |
dc.description.nature | link_to_subscribed_fulltext | - |
dc.identifier.doi | 10.1007/s10295-009-0552-9 | en_HK |
dc.identifier.pmid | 19277741 | - |
dc.identifier.scopus | eid_2-s2.0-67649103626 | en_HK |
dc.identifier.hkuros | 158729 | en_US |
dc.identifier.volume | 36 | en_HK |
dc.identifier.issue | 6 | en_HK |
dc.identifier.spage | 787 | en_HK |
dc.identifier.epage | 800 | en_HK |
dc.identifier.isi | WOS:000266385900002 | - |
dc.publisher.place | Germany | en_HK |
dc.identifier.citeulike | 4176991 | - |
dc.identifier.issnl | 1367-5435 | - |