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postgraduate thesis: The relationship between the evolutionary origin of PACAP/GCG subfamily and two rounds of whole genome duplication in the beginning of vertebrate evolution

TitleThe relationship between the evolutionary origin of PACAP/GCG subfamily and two rounds of whole genome duplication in the beginning of vertebrate evolution
Authors
Advisors
Advisor(s):Chow, BKCLee, TO
Issue Date2017
PublisherThe University of Hong Kong (Pokfulam, Hong Kong)
Citation
On, S. [安世桓]. (2017). The relationship between the evolutionary origin of PACAP/GCG subfamily and two rounds of whole genome duplication in the beginning of vertebrate evolution. (Thesis). University of Hong Kong, Pokfulam, Hong Kong SAR.
AbstractPeptides from pituitary adenylate cyclase‐activating polypeptide (PACAP) and glucagon subfamilies were called “brain‐gut‐peptides” because of their pleiotropic actions both in the CNS and the digestive system. It has long been proposed that these peptides with similar amino acid sequence and physiological function share the same evolutionary origin prior to the emergence of vertebrates and two rounds of whole genome duplication (2WGD). However, identification of their orthologs in invertebrates had been hindered due to the lack of significant sequence identity between putative members in invertebrates and known peptides in vertebrates. Recently, successful identification of putative amphioxus (Branchiostoma floridae, bf) parathyroid hormone‐like peptides and PACAP/glucagon‐like peptides (PACAP/GLUCs) by Mirabeau and Joly allowed us to re‐investigate the evolutionary origins of the two subfamilies in ancestral chordates using cephalochordates as animal model. In this project, five amphioxus receptors phylogenetically belonging to independent clade between PTH and PACAP/glucagon receptor subfamilies were characterized. These cloned receptors showed synteny with most receptors from PTH and PACAP/glucagon receptor subfamilies in three vertebrate species, spotted gar, Xenopus and human, indicating that the genomic environment of these receptor subfamilies in ancestral chordates were preserved by amphioxus. Functional analyses revealed that one of the cloned receptors (bf98C) can be activated by endogenous parathyroid hormone‐like peptides, whereas another receptor (bf95) only interacted with PACAP/GLUCs, demonstrating the existence of PTHs‐receptor as well as PACAP/GLUCs‐receptor pairings prior to the origin of vertebrates. Therefore, PACAP and glucagon receptor subfamilies as well as their ligands likely evolved from a pairing system homologous to bf95‐PACAP/GLUCs in ancestral chordates through 2WGD. Further studies on the physiology of the most potent agonist, PACAP/GLUCa, among PACAP/GLUCs showed that the PACAP/GLUCsreceptor system possessed many characteristics of its vertebrate orthologs/paralogs. By qRT‐PCR and immunofluorescence staining it was found that PACAP/GLUCa also followed the “brain‐gut” pattern with abundant expression of the peptides and its transcript in the nucleus of Rohde in the nerve cord, homolog of neurosecretory cells of the hypothalamus, Hatschek’s pit (Hp), homolog of vertebrate adenohypophysis, and the digestive tract. Moreover, we have shown that after 72hrs’ exposure to high salinity (35‰) expression of gh‐l and pacap/gluca transcripts in the head of amphioxi increased. This indicates that as growth hormone‐like protein (GH‐L), which is mainly expressed in Hp of amphioxus, like vertebrates, is involved in high salt tolerance. Furthermore, treatment of PACAP/GLUCa after 72hrs acclimation to high salinity external environment promoted gh‐l transcript level in amphioxi’s head. The involvement of PACAP/GLUCa in upregulation of GH‐L in the pit mimics the regulation of GH by growth hormone releasing hormones in vertebrates, suggesting the homolog between the operation of Hp and that of the vertebrate adenohypophysis. Since feeding and growth control were proposed to be the promising function of this external organ, Hp, the presence of PACAP/GLUCa in this primitive adenohypophysis likely served as a foundation for developing the complicated control of feeding behavior and growth by peptides from PACAP and GCG subfamilies in the hypothalamus during the evolution of vertebrates.
DegreeDoctor of Philosophy
SubjectPolypeptides
Chordata - Evolution
Dept/ProgramBiological Sciences
Persistent Identifierhttp://hdl.handle.net/10722/255404

 

DC FieldValueLanguage
dc.contributor.advisorChow, BKC-
dc.contributor.advisorLee, TO-
dc.contributor.authorOn, Sai-wun-
dc.contributor.author安世桓-
dc.date.accessioned2018-07-05T07:43:25Z-
dc.date.available2018-07-05T07:43:25Z-
dc.date.issued2017-
dc.identifier.citationOn, S. [安世桓]. (2017). The relationship between the evolutionary origin of PACAP/GCG subfamily and two rounds of whole genome duplication in the beginning of vertebrate evolution. (Thesis). University of Hong Kong, Pokfulam, Hong Kong SAR.-
dc.identifier.urihttp://hdl.handle.net/10722/255404-
dc.description.abstractPeptides from pituitary adenylate cyclase‐activating polypeptide (PACAP) and glucagon subfamilies were called “brain‐gut‐peptides” because of their pleiotropic actions both in the CNS and the digestive system. It has long been proposed that these peptides with similar amino acid sequence and physiological function share the same evolutionary origin prior to the emergence of vertebrates and two rounds of whole genome duplication (2WGD). However, identification of their orthologs in invertebrates had been hindered due to the lack of significant sequence identity between putative members in invertebrates and known peptides in vertebrates. Recently, successful identification of putative amphioxus (Branchiostoma floridae, bf) parathyroid hormone‐like peptides and PACAP/glucagon‐like peptides (PACAP/GLUCs) by Mirabeau and Joly allowed us to re‐investigate the evolutionary origins of the two subfamilies in ancestral chordates using cephalochordates as animal model. In this project, five amphioxus receptors phylogenetically belonging to independent clade between PTH and PACAP/glucagon receptor subfamilies were characterized. These cloned receptors showed synteny with most receptors from PTH and PACAP/glucagon receptor subfamilies in three vertebrate species, spotted gar, Xenopus and human, indicating that the genomic environment of these receptor subfamilies in ancestral chordates were preserved by amphioxus. Functional analyses revealed that one of the cloned receptors (bf98C) can be activated by endogenous parathyroid hormone‐like peptides, whereas another receptor (bf95) only interacted with PACAP/GLUCs, demonstrating the existence of PTHs‐receptor as well as PACAP/GLUCs‐receptor pairings prior to the origin of vertebrates. Therefore, PACAP and glucagon receptor subfamilies as well as their ligands likely evolved from a pairing system homologous to bf95‐PACAP/GLUCs in ancestral chordates through 2WGD. Further studies on the physiology of the most potent agonist, PACAP/GLUCa, among PACAP/GLUCs showed that the PACAP/GLUCsreceptor system possessed many characteristics of its vertebrate orthologs/paralogs. By qRT‐PCR and immunofluorescence staining it was found that PACAP/GLUCa also followed the “brain‐gut” pattern with abundant expression of the peptides and its transcript in the nucleus of Rohde in the nerve cord, homolog of neurosecretory cells of the hypothalamus, Hatschek’s pit (Hp), homolog of vertebrate adenohypophysis, and the digestive tract. Moreover, we have shown that after 72hrs’ exposure to high salinity (35‰) expression of gh‐l and pacap/gluca transcripts in the head of amphioxi increased. This indicates that as growth hormone‐like protein (GH‐L), which is mainly expressed in Hp of amphioxus, like vertebrates, is involved in high salt tolerance. Furthermore, treatment of PACAP/GLUCa after 72hrs acclimation to high salinity external environment promoted gh‐l transcript level in amphioxi’s head. The involvement of PACAP/GLUCa in upregulation of GH‐L in the pit mimics the regulation of GH by growth hormone releasing hormones in vertebrates, suggesting the homolog between the operation of Hp and that of the vertebrate adenohypophysis. Since feeding and growth control were proposed to be the promising function of this external organ, Hp, the presence of PACAP/GLUCa in this primitive adenohypophysis likely served as a foundation for developing the complicated control of feeding behavior and growth by peptides from PACAP and GCG subfamilies in the hypothalamus during the evolution of vertebrates.-
dc.languageeng-
dc.publisherThe University of Hong Kong (Pokfulam, Hong Kong)-
dc.relation.ispartofHKU Theses Online (HKUTO)-
dc.rightsThe author retains all proprietary rights, (such as patent rights) and the right to use in future works.-
dc.rightsThis work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License.-
dc.subject.lcshPolypeptides-
dc.subject.lcshChordata - Evolution-
dc.titleThe relationship between the evolutionary origin of PACAP/GCG subfamily and two rounds of whole genome duplication in the beginning of vertebrate evolution-
dc.typePG_Thesis-
dc.description.thesisnameDoctor of Philosophy-
dc.description.thesislevelDoctoral-
dc.description.thesisdisciplineBiological Sciences-
dc.description.naturepublished_or_final_version-
dc.identifier.doi10.5353/th_991044019384703414-
dc.date.hkucongregation2018-
dc.identifier.mmsid991044019384703414-

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