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Article: Alcanivorax dieselolei sp. nov., a novel alkane-degrading bacterium isolated from sea water and deep-sea sediment

TitleAlcanivorax dieselolei sp. nov., a novel alkane-degrading bacterium isolated from sea water and deep-sea sediment
Authors
Issue Date2005
PublisherSociety for General Microbiology. The Journal's web site is located at http://ijs.sgmjournals.org
Citation
International Journal Of Systematic And Evolutionary Microbiology, 2005, v. 55 n. 3, p. 1181-1186 How to Cite?
AbstractTwo bacterial strains, B-5T and NO1A, were isolated from the surface water of the Bohai Sea and deep-sea sediment of the east Pacific Ocean, respectively. Both strains were halophilic, aerobic, Gram-negative, non-spore-forming, catalase- and oxidase-positive motile rods. They grew on a restricted spectrum of organic compounds, including some organic acids and alkanes. On the basis of 16S rRNA gene sequence similarity, strains B-5T and NO1A were shown to belong to the γ-Proteobacteria. Highest similarity values were found with Alcanivorax venustensis (95.2%), Alcanivorax jadensis (94.6%) and Alcanivorax borkumensis (94.1 %). Principal fatty acids of both strains were C16:0, C16:1ω7c and C18:1ω7c. The chemotaxonomically characteristic fatty acid C19:0 cyclo ω8c was also detected. On the basis of the above, together with results of physiological and biochemical tests, DNA-DNA hybridization, comparisons of 16S-23S internal transcribed spacer sequences and comparisons of the partial deduced amino acid sequence of alkane hydroxylase, both strains were affiliated to the genus Alcanivorax but were differentiated from recognized Alcanivorax species. Therefore, a novel species, Alcanivorax dieselolei sp. nov., represented by strains B-5T and NO1A is proposed, with the type strain B-5T(=DSM 16502T=CGMCC 1.3690T). © 2005 IUMS.
Persistent Identifierhttp://hdl.handle.net/10722/182321
ISSN
2015 Impact Factor: 2.439
2015 SCImago Journal Rankings: 1.088
ISI Accession Number ID
References

 

DC FieldValueLanguage
dc.contributor.authorLiu, Cen_US
dc.contributor.authorShao, Zen_US
dc.date.accessioned2013-04-23T08:18:38Z-
dc.date.available2013-04-23T08:18:38Z-
dc.date.issued2005en_US
dc.identifier.citationInternational Journal Of Systematic And Evolutionary Microbiology, 2005, v. 55 n. 3, p. 1181-1186en_US
dc.identifier.issn1466-5026en_US
dc.identifier.urihttp://hdl.handle.net/10722/182321-
dc.description.abstractTwo bacterial strains, B-5T and NO1A, were isolated from the surface water of the Bohai Sea and deep-sea sediment of the east Pacific Ocean, respectively. Both strains were halophilic, aerobic, Gram-negative, non-spore-forming, catalase- and oxidase-positive motile rods. They grew on a restricted spectrum of organic compounds, including some organic acids and alkanes. On the basis of 16S rRNA gene sequence similarity, strains B-5T and NO1A were shown to belong to the γ-Proteobacteria. Highest similarity values were found with Alcanivorax venustensis (95.2%), Alcanivorax jadensis (94.6%) and Alcanivorax borkumensis (94.1 %). Principal fatty acids of both strains were C16:0, C16:1ω7c and C18:1ω7c. The chemotaxonomically characteristic fatty acid C19:0 cyclo ω8c was also detected. On the basis of the above, together with results of physiological and biochemical tests, DNA-DNA hybridization, comparisons of 16S-23S internal transcribed spacer sequences and comparisons of the partial deduced amino acid sequence of alkane hydroxylase, both strains were affiliated to the genus Alcanivorax but were differentiated from recognized Alcanivorax species. Therefore, a novel species, Alcanivorax dieselolei sp. nov., represented by strains B-5T and NO1A is proposed, with the type strain B-5T(=DSM 16502T=CGMCC 1.3690T). © 2005 IUMS.en_US
dc.languageengen_US
dc.publisherSociety for General Microbiology. The Journal's web site is located at http://ijs.sgmjournals.orgen_US
dc.relation.ispartofInternational Journal of Systematic and Evolutionary Microbiologyen_US
dc.subject.meshAerobiosisen_US
dc.subject.meshAlkanes - Metabolismen_US
dc.subject.meshBase Compositionen_US
dc.subject.meshCarboxylic Acids - Metabolismen_US
dc.subject.meshCatalase - Analysisen_US
dc.subject.meshDna, Bacterial - Chemistry - Isolation & Purificationen_US
dc.subject.meshDna, Ribosomal - Chemistry - Isolation & Purificationen_US
dc.subject.meshDna, Ribosomal Spacer - Geneticsen_US
dc.subject.meshFatty Acids - Analysis - Isolation & Purificationen_US
dc.subject.meshGenes, Rrnaen_US
dc.subject.meshGentian Violeten_US
dc.subject.meshGeologic Sediments - Microbiologyen_US
dc.subject.meshGrowth Inhibitors - Pharmacologyen_US
dc.subject.meshHalomonadaceae - Classification - Cytology - Isolation & Purification - Metabolismen_US
dc.subject.meshHydrolases - Geneticsen_US
dc.subject.meshMolecular Sequence Dataen_US
dc.subject.meshMovementen_US
dc.subject.meshNucleic Acid Hybridizationen_US
dc.subject.meshOxidoreductases - Analysisen_US
dc.subject.meshPacific Oceanen_US
dc.subject.meshPhenazinesen_US
dc.subject.meshPhylogenyen_US
dc.subject.meshRna, Bacterial - Geneticsen_US
dc.subject.meshRna, Ribosomal, 16S - Geneticsen_US
dc.subject.meshSeawater - Microbiologyen_US
dc.subject.meshSequence Analysis, Dnaen_US
dc.subject.meshSodium Chloride - Pharmacologyen_US
dc.subject.meshWater Microbiologyen_US
dc.titleAlcanivorax dieselolei sp. nov., a novel alkane-degrading bacterium isolated from sea water and deep-sea sedimenten_US
dc.typeArticleen_US
dc.identifier.emailLiu, C: lchenli@hku.hken_US
dc.identifier.authorityLiu, C=rp01732en_US
dc.description.naturelink_to_subscribed_fulltexten_US
dc.identifier.doi10.1099/ijs.0.63443-0en_US
dc.identifier.pmid15879252-
dc.identifier.scopuseid_2-s2.0-19644397623en_US
dc.relation.referenceshttp://www.scopus.com/mlt/select.url?eid=2-s2.0-19644397623&selection=ref&src=s&origin=recordpageen_US
dc.identifier.volume55en_US
dc.identifier.issue3en_US
dc.identifier.spage1181en_US
dc.identifier.epage1186en_US
dc.identifier.isiWOS:000229362700030-
dc.publisher.placeUnited Kingdomen_US
dc.identifier.scopusauthoridLiu, C=8559807600en_US
dc.identifier.scopusauthoridShao, Z=34880764700en_US

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